Tutorials
From BioPerl
BioPerl tutorials that anyone is willing to share.
Contents |
Jason Stajich's tutorials
My more recent tutorials are typically better but there may be some problem sets that are useful from the older tutorials.
2008
2007
- NESCent 2007 Phyloinformatics taught in part with Rutger Vos (his slides are separate) held at NESCent.
- Phylogenetics workflows with BioPerl tutorial at ISMB2007 taught with Albert Vilella
2006
2004
- Duke BioPerl Tutorial - 3 day
- DPI BioPerl Tutorial - 1 day
2003
- Genome Informatics - 1 day
- Duke BioPerl Tutorial - 3 day
- UT BioPerl Tutorial - 1 day
2001 tutorials
Other tutorials
- The Bioperl Tutorial
- Bptutorial.pl
- Standard talk/slides tutorials by Jason Stajich
- http://jason.open-bio.org
- Pasteur Institute Bioperl 1.0 course
- http://www.pasteur.fr/recherche/unites/sis/formation/bioperl/
- WIBR Bioinformatics and Research Computing Unix, Perl, and BioPerl (2004) course
- http://jura.wi.mit.edu/bio/education/bioinfo-mini/unix-perl/
- University of Michigan tutorials
- http://www.bioinformatics.med.umich.edu/research/tutorials
- Jussi and Heikki's Funet-TV Bioperl course
- http://tv.funet.fi/media-arkisto/fi/csc/2004/kurssit/bioperl/index.jsp
- Aaron Mackey's BioPerl handouts
- http://stein.cshl.org/genome_informatics/
- Hilmar Lapp's BOSC 2003 talk on "Persistent Bioperl"
- http://www.open-bio.org/bosc2003/slides/Persistent_Bioperl_BOSC03.pdf
- Approaches to Web Development for Bioinformatics
- http://medicalcomputing.net/tools_dna1.php
Tutorials on this site
- Tutorial:Installing Perl modules
- A description of how to install Perl modules, set your path, install packaged modules on specific platforms
