Talk:Converting alignment files

XMFA/FASTA confusion

Sometimes, the script will think that your input is FASTA format. This especially happens if you do not have the XMFA module in your @INC path. A quick fix is to update PERL5LIB like so:

export PERL5LIB=$PERL5LIB:/new/path

--Lskatz 18:39, 6 November 2012 (UTC)