Sweep

The Sweep program has now a new version with a decoupled command-line and GUI interface, so the command-line version can be wrapped up into BioPerl Run.

The input files are basically:

- the "emphase" output file (see sweep doc (page6 Genotype data) Bio::PopGen::IO::emphase(?))

- a SNP file with the genomic coordinates with a header line like "snpid\tchr\tHG17" (for NCBI35)

\avilella