User contributions
- 18:39, 6 November 2012 (diff | hist) m Talk:Converting alignment files (→XMFA/FASTA confusion) (top)
- 18:39, 6 November 2012 (diff | hist) N Talk:Converting alignment files (XMFA/FASTA confusion)
- 15:30, 3 October 2012 (diff | hist) m Talk:Converting FASTQ to FASTA QUAL files (top)
- 21:32, 2 October 2012 (diff | hist) m Talk:Converting FASTQ to FASTA QUAL files (→perl one-liners)
- 21:30, 2 October 2012 (diff | hist) Talk:Converting FASTQ to FASTA QUAL files (→perl one-liners)
- 21:29, 2 October 2012 (diff | hist) Talk:Converting FASTQ to FASTA QUAL files (→perl one-liners: new section)
- 21:26, 2 October 2012 (diff | hist) Converting FASTQ to FASTA QUAL files (added credit to myself) (top)
- 21:18, 10 August 2012 (diff | hist) N Concatenating genbank entries (Created page with 'This script concatenates all contigs in a genbank file into one contig. Useful for browsing an entire, but fragmented, genome in a genome browser like Apollo. --~~~~ <perl> #!…') (top)
- 20:10, 3 August 2012 (diff | hist) Converting alignment files (top)
- 22:43, 24 February 2012 (diff | hist) Lee Katz (→Modules) (top)
- 22:41, 24 February 2012 (diff | hist) Lee Katz (→Question: Who am I?)
- 18:30, 21 February 2012 (diff | hist) Splitting MiSeq lane (added cats) (top)
- 18:30, 21 February 2012 (diff | hist) N Splitting MiSeq lane (Created page with 'This is a script for splitting a full lane from a multiplexed MiSeq run into individual tags. <perl> #!/usr/bin/env perl # Author: Lee Katz <lkatz@cdc.gov> # Enteric Diseases L…')
- 18:24, 21 February 2012 (diff | hist) Converting alignment files (added my sig)
- 16:54, 21 February 2012 (diff | hist) N Converting alignment files (Created page with 'This script will convert an alignment file to another alignment file format. I use it to convert Mauve xmfa output to a directory of fasta alignments, but it is useful for conve…')
- 23:47, 8 November 2011 (diff | hist) HOWTO:Short-read assemblies with maq (Added in some perl tags for syntax highlighting) (top)
- 14:19, 5 August 2011 (diff | hist) m Converting FASTQ to FASTA QUAL files
- 14:19, 5 August 2011 (diff | hist) Converting FASTQ to FASTA QUAL files (I changed the main() return value. It was incorrectly 1 (meaning, it exited with an error). Also added a TODO)
- 14:41, 29 July 2011 (diff | hist) N Module Discussion:Bio::Seq::RichSeq (Taxon)
- 15:53, 25 April 2011 (diff | hist) N Talk:Species names from accession numbers (The other way around) (top)
- 19:55, 13 April 2011 (diff | hist) Talk:Converting FASTQ to FASTA QUAL files (→Critiques)
- 17:08, 13 April 2011 (diff | hist) Converting FASTQ to FASTA QUAL files (Added category scrapbook per CJField's suggestion)
- 23:16, 11 April 2011 (diff | hist) N Talk:Converting FASTQ to FASTA QUAL files (Critiques)
- 23:13, 11 April 2011 (diff | hist) Converting FASTQ to FASTA QUAL files (added category)
- 23:11, 11 April 2011 (diff | hist) N Converting FASTQ to FASTA QUAL files (Created page with 'I came up with a script to accompany Minimo, which is a nice assembler that can be fed by Illumina reads (but it doesn't read FASTQ). Therefore there needs to be a fast way to c…')
- 22:59, 11 April 2011 (diff | hist) N Lee Katz/sandbox (Created page with 'I came up with a script to accompany Minimo, which is a nice assembler that can be fed by Illumina reads (but it doesn't read FASTQ). Therefore there needs to be a fast way to c…') (top)
- 22:46, 11 April 2011 (diff | hist) Lee Katz (→Etc)
- 22:45, 11 April 2011 (diff | hist) Lee Katz (→Etc)
- 22:41, 11 April 2011 (diff | hist) Lee Katz
- 20:02, 2 March 2011 (diff | hist) Whole genome alignment (added mauve)
- 20:31, 26 January 2011 (diff | hist) N HOWTO Discussion:Trees (Created page with 'Could someone write documentation on how to read/write from a string, like in the HOWTO for SeqIO? Much appreciated. --~~~~')
- 00:10, 2 July 2010 (diff | hist) Talk:XMFA multiple alignment format (→strandedness: nevermind) (top)
- 00:03, 2 July 2010 (diff | hist) N Talk:XMFA multiple alignment format (Created page with '==strandedness== AlignIO doesn't seem to pick up on the strand unfortunately --~~~~')
- 23:56, 1 July 2010 (diff | hist) XMFA multiple alignment format (elaborated on the defline; made the text describing the hyperlink into the hyperlink element) (top)
- 21:14, 17 March 2010 (diff | hist) HOWTO Discussion:BlastPlus (→Factory construction and initialization: added signature)
- 21:14, 17 March 2010 (diff | hist) N HOWTO Discussion:BlastPlus (Factory construction and initialization)
- 21:12, 17 March 2010 (diff | hist) HOWTO:BlastPlus (→BLAST method execution: corrected the part that said that 7 is tabular. Actually it's XML)
- 20:23, 14 February 2010 (diff | hist) N User talk:Lskatz (moved User talk:Lskatz to Talk:Lee Katz: I wanted to be listed under "L" under the People category page.) (top)
- 20:23, 14 February 2010 (diff | hist) N User:Lskatz (moved User:Lskatz to Lee Katz: I wanted to be listed under "L" under the People category page.) (top)
- 20:23, 14 February 2010 (diff | hist) m Lee Katz (moved User:Lskatz to Lee Katz: I wanted to be listed under "L" under the People category page.)
- 20:23, 14 February 2010 (diff | hist) m Talk:Lee Katz (moved User talk:Lskatz to Talk:Lee Katz: I wanted to be listed under "L" under the People category page.) (top)
- 20:21, 14 February 2010 (diff | hist) Lee Katz (added category:people)
- 21:11, 13 February 2010 (diff | hist) Lee Katz (→Modules)
- 21:00, 13 February 2010 (diff | hist) m Lee Katz (→Question: Who am I?)
- 21:00, 13 February 2010 (diff | hist) N Lee Katz (Created page with '==Question: Who am I?== Answer: Lee Katz. I'm a bioinformatician at [http://gatech.edu GA Tech]. My interests are in comparative genomics and epidemiology. ==Modules== I'm writ...')
- 23:00, 12 February 2010 (diff | hist) HOWTO:StandAloneBlast (→Example session: I just copied and pasted the section from http://www.bioperl.org/wiki/HOWTO:Beginners#BLAST . I don't see the point of leaving this blank if the example already exists.)
- 19:39, 25 April 2008 (diff | hist) Talk:Mailing lists
