SLAM
From BioPerl
References
- Dewey C, Wu JQ, Cawley S, Alexandersson M, Gibbs R, and Pachter L. Accurate identification of novel human genes through simultaneous gene prediction in human, mouse, and rat. Genome Res. 2004 Apr;14(4):661-4. DOI:10.1101/gr.1939804 |
- Cawley S, Pachter L, and Alexandersson M. SLAM web server for comparative gene finding and alignment. Nucleic Acids Res. 2003 Jul 1;31(13):3507-9.
- Alexandersson M, Cawley S, and Pachter L. SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model. Genome Res. 2003 Mar;13(3):496-502. DOI:10.1101/gr.424203 |