LVB

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Daniel Barker's parsimony reconstruction algorithm to build a phylogeny from a nucleotide alignment, using a simulated annealing heuristic search [1]. The tool is available here.

References

  1. Barker D. LVB: parsimony and simulated annealing in the search for phylogenetic trees. Bioinformatics 2004 Jan 22; 20(2) 274-5. pmid:14734321. PubMed HubMed [lvb]
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