InParanoid

InParanoid

Eukaryotic Orthologous Groups based on best reciprocal hits with correction for paralogous families and a bootstrapping approach remm2001. A precomputed database obrien2005 is available for a set of eukaryotic genomes.

MultiParanoid

Combine multiple in-paranoid pairwise orthology analyses into a single set of orthologous gene predictions. Multiparanoidmultiparanoid site describes the approach in more detail.

References

<biblio>

1. remm2001 pmid=11743721
2. obrien2005 pmid=15608241
3. multiparanoid pmid=16873526

</biblio>