Gbrowse
From BioPerl
The Generic Genome Browser written by Lincoln Stein with collaboration from many member of the community. The project webpage provides some example installations. It is deployed for many Model Organism Databases or MODs as well as disease and process specific databases. See the publication highlighting its design [1].
Also see the GBrowse page at www.gmod.org.
Sites using Gbrowse
- Wormbase
- Saccharomyces Genome Database
- Flybase
- Dictybase
- Fungal Genome Database
- Mouse Genome Informatics
- Rat Genome Database
- Paramecium DB
- Extremophiles
- Human HapMap
- OryGenesDB
- Pseudomonas
- Tribolium (Beetle)
- Tetrahymena
- Marine Biological Lab projects including Giardia Trypanosome brucei, many others
- Solonaceae Genome Network
- Maize Genome Database (MIPS)
- Maize Genome Assembly
- Toxoplasma
- Cryptosporidium
- GeneDB at WT Sanger Institute including S. pombe
- Marine Roseobacters
- Rice-Magnaporthe interaction database
- Candida Genome Database
- GrainGenes: Triticeae and Avena
- Type I Diabetes
- Biohealthbase
- Aniseed Genome Browser
