Core 0.4.1 0.4.2 delta

These are detailed notes on changes made between release-0-04-1 and release-0-04-2.

Bio::DB::Abstract

Added abstract database class

Added token to permit compilation.

Bio::Root::Utilities

Appending '.tmp.bioperl' to the name of temporary files created by compress() and uncompress() to make it easy to identify bioperl-generated temp files.

Bio::SearchDist

Added SearchDist

Added token to permit compilation.

Bio::Seq

Changed reverse() calls to CORE::reverse() to clear up ambiguity.

Bio::Tools::Blast

Bug fixes in Blast package, version 0.073: Backwards compatibility with BLAST-GP 2.0.2 and improved error handling in Sbjct.pm

Bio::UnivAln

Changed reverse() calls to CORE::reverse() to clear up ambiguity.

Makefile.PL

Added new version number (0.04.2)and updated changes for this release.