AVID

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AVID is designed to be fast, memory efficient, and practical for sequence alignments of large genomic regions up to megabases long [1]. It has its own website.

References

  1. Bray N, Dubchak I, and Pachter L. AVID: A global alignment program. Genome Res 2003 Jan; 13(1) 97-102. doi:10.1101/gr.789803 pmid:12529311. PubMed HubMed [AVID]
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