January 2008 Archives by thread

• Messages sorted by: [ subject ] [ author ] [ date ]
• More info on this list...

Starting: Thu Jan 3 09:29:09 EST 2008
Ending: Thu Jan 31 15:21:18 EST 2008
Messages: 121

• [Bioperl-l] BioPerl and NHX tree   Laurence Amilhat
  • [Bioperl-l] BioPerl and NHX tree   aaron.j.mackey at gsk.com
    • [Bioperl-l] BioPerl and NHX tree   Laurence Amilhat
• [Bioperl-l] How to retrieve a persistent object by bioperl-db?   Hilmar Lapp
• [Bioperl-l] Anything up with cvs/svn?   Scott Cain
  • [Bioperl-l] Anything up with cvs/svn?   Hilmar Lapp
  • [Bioperl-l] Anything up with cvs/svn?   Jason Stajich
    • [Bioperl-l] Anything up with cvs/svn?   Scott Cain
• [Bioperl-l] Automatically accepting defaults for `perl Build.PL`   Scott Cain
  • [Bioperl-l] Automatically accepting defaults for `perl Build.PL`   Chris Fields
  • [Bioperl-l] Automatically accepting defaults for `perl Build.PL`   Sendu Bala
    • [Bioperl-l] Automatically accepting defaults for `perl Build.PL`   Scott Cain
• [Bioperl-l] Parsing SwissProt annotation in comment   Samuel GRANJEAUD - IR/IFR137
  • [Bioperl-l] Parsing SwissProt annotation in comment   Brian Osborne
• [Bioperl-l] bioperl based database infrastucture for directed graphs   Robson Francisco de Souza
  • [Bioperl-l] bioperl based database infrastucture for directed graphs   Sendu Bala
    • [Bioperl-l] bioperl based database infrastucture for directed graphs   Chris Fields
  • [Bioperl-l] bioperl based database infrastucture for directed graphs   Chris Mungall
    • [Bioperl-l] bioperl based database infrastucture for directed graphs   Robson Francisco de Souza
      • [Bioperl-l] bioperl based database infrastucture for directed graphs   Scott Cain
  • [Bioperl-l] bioperl based database infrastucture for directed graphs   Chris Fields
• [Bioperl-l] Beginners HOWTO query a range of lengths 0:3000[SLEN]   Alexander Ptok
  • [Bioperl-l] Beginners HOWTO query a range of lengths 0:3000[SLEN]   Brian Osborne
• [Bioperl-l] pairwise_kaks.PLS: verbose rquired by PAML   Stefan Kirov
• [Bioperl-l] Beginners HOWTO query a range of lengths 0:3000[SLEN]   Brian Osborne
• [Bioperl-l] Recommended way to download qual files from Genbank?   Phillip San Miguel
  • [Bioperl-l] Recommended way to download qual files from Genbank?   Chris Fields
    • [Bioperl-l] Recommended way to download qual files from Genbank?   Cook, Malcolm
      • [Bioperl-l] Recommended way to download qual files from Genbank?   Phillip San Miguel
      • [Bioperl-l] Recommended way to download qual files from Genbank?   Cook, Malcolm
      • [Bioperl-l] Recommended way to download qual files from Genbank?   Cui, Wenwu (NIH/NLM/NCBI) [C]
    • [Bioperl-l] Recommended way to download qual files from Genbank?   Phillip San Miguel
• [Bioperl-l] Recommended way to download qual files from Genbank?   Phillip San Miguel
• [Bioperl-l] GenBank format and feature names > 15 char   Scott Cain
  • [Bioperl-l] GenBank format and feature names > 15 char   Lincoln Stein
    • [Bioperl-l] GenBank format and feature names > 15 char   Chris Fields
      • [Bioperl-l] GenBank format and feature names > 15 char   Lincoln Stein
      • [Bioperl-l] GenBank format and feature names > 15 char   Scott Cain
• [Bioperl-l] Problem to extract protein_id and transcript from CDS   Diogo Tschoeke
  • [Bioperl-l] Problem to extract protein_id and transcript from CDS   Marc Logghe
• [Bioperl-l] redundant sequences   Sonal Singhal
  • [Bioperl-l] redundant sequences   Cook, Malcolm
• [Bioperl-l] Subversion migration complete   Chris Fields
• [Bioperl-l] [rt.cpan.org #29533] Bio::SeqIO::interpro depends on XML::DOM::XPath   Chris Fields via RT
• [Bioperl-l] Can't locate object method "is_compatible" via package "Bio::Tree::Tree"   viping
  • [Bioperl-l] Can't locate object method "is_compatible" via package "Bio::Tree::Tree"   Sendu Bala
    • [Bioperl-l] Can't locate object method "is_compatible" via package "Bio::Tree::Tree"   Sendu Bala
    • [Bioperl-l] Can't locate object method "is_compatible" via package"Bio::Tree::Tree"   viping
    • [Bioperl-l] Can't locate object method "is_compatible" via package "Bio::Tree::Tree"   Chris Fields
• [Bioperl-l] Parsing Primer3 output   Nathan S. Haigh
  • [Bioperl-l] Parsing Primer3 output   Chris Fields
• [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Hang
  • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Scott Cain
    • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Hang
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Scott Cain
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Hang
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Scott Cain
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Chris Fields
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Hang
      • [Bioperl-l] Problem: Can't call method "features" on an undefined value at BIO::DB::GFF.pl   Chris Fields
• [Bioperl-l] Problem with Bio::ASN1::EntrezGene::Indexer   Yutaro Kumagai
• [Bioperl-l] [Bioperl-guts-l] [14455] bioperl-live/trunk/Bio/Graphics/Glyph/gene.pm: fixed up the gene glyph so that it works properly with CDS-only genes   Jason Stajich
• [Bioperl-l] parsing ACE file   Stefano Ghignone
  • [Bioperl-l] parsing ACE file   Phillip San Miguel
    • [Bioperl-l] parsing ACE file   Florent Angly
• [Bioperl-l] bioperl on mac   Katherine Wendelsdorf
  • [Bioperl-l] bioperl on mac   Brian Osborne
    • [Bioperl-l] bioperl on mac   Jason Stajich
• [Bioperl-l] Wiki inconsistency?   Ryan Golhar
  • [Bioperl-l] Wiki inconsistency?   Chris Fields
  • [Bioperl-l] Wiki inconsistency?   Sendu Bala
    • [Bioperl-l] Wiki inconsistency?   Nathan S Haigh
• [Bioperl-l] GenBank updated sequence not being retrieved   Ryan Golhar
• [Bioperl-l] Quickest Codon Based MSA?   Johan Nilsson
  • [Bioperl-l] Quickest Codon Based MSA?   Jason Stajich
  • [Bioperl-l] Quickest Codon Based MSA?   Fairley, Derek
  • [Bioperl-l] Quickest Codon Based MSA?   Sendu Bala
• [Bioperl-l] Bioinformatics Job Opening at dictyBase in Chicago   Eric Just
• [Bioperl-l] Question from a bioperl newbie   ANJAN PURKAYASTHA
  • [Bioperl-l] Question from a bioperl newbie   Brian Osborne
• [Bioperl-l] Bio::DB::Taxonomy, Bio::Tree, and how to combine trees   Tristan Lefebure
  • [Bioperl-l] Bio::DB::Taxonomy, Bio::Tree, and how to combine trees   Sendu Bala
• [Bioperl-l] BioPerl module to extract sequence from gene names   Edward Wijaya
  • [Bioperl-l] BioPerl module to extract sequence from gene names   Dave Messina
  • [Bioperl-l] BioPerl module to extract sequence from gene names   Brian Osborne
• [Bioperl-l] bioperl DB error   snoze pa
• [Bioperl-l] bioseqDB error   snoze pa
  • [Bioperl-l] bioseqDB error   snoze pa
• [Bioperl-l] a question on "move_id_to_bootstrap" usage   Jason Stajich
• [Bioperl-l] PRIB 2008   Shandar Ahmad
• [Bioperl-l] Fwd: REST APIs for Cipres Web Portal   Hilmar Lapp
  • [Bioperl-l] Fwd: REST APIs for Cipres Web Portal   Chris Fields
    • [Bioperl-l] Fwd: REST APIs for Cipres Web Portal   Hilmar Lapp
      • [Bioperl-l] Fwd: REST APIs for Cipres Web Portal   Chris Fields
• [Bioperl-l] Please remove my letter from your site   Susanta Roy
  • [Bioperl-l] Please remove my letter from your site   Chris Fields
• [Bioperl-l] bioseqDB error   snoze pa
  • [Bioperl-l] bioseqDB error   Hilmar Lapp
    • [Bioperl-l] bioseqDB error   snoze pa
• [Bioperl-l] Bio::DB::GenBank and large number of requests   Tristan Lefebure
  • [Bioperl-l] Bio::DB::GenBank and large number of requests   Chris Fields
    • [Bioperl-l] Bio::DB::GenBank and large number of requests   Alexander Kozik
  • [Bioperl-l] Bio::DB::GenBank and large number of requests   snoze pa
  • [Bioperl-l] Bio::DB::GenBank and large number of requests   Georg Otto
• [Bioperl-l] loading sequence error bioseq   snoze pa
  • [Bioperl-l] loading sequence error bioseq   Hilmar Lapp
• [Bioperl-l] Bio::DB::GenBank and large number of requests   Chris Fields
  • [Bioperl-l] Bio::DB::GenBank and large number of requests   Tristan Lefebure
    • [Bioperl-l] Bio::DB::GenBank and large number of requests   Chris Fields
    • [Bioperl-l] Bio::DB::GenBank and large number of requests   Smithies, Russell
    • [Bioperl-l] Bio::DB::GenBank and large number of requests   Chris Fields
• [Bioperl-l] fetch dna seqs from genbank protein ids   Albert Vilella
• [Bioperl-l] load_seqdatabase help   snoze pa
• [Bioperl-l] found the error tarp in load_seqdatabase.pl   snoze pa
  • [Bioperl-l] found the error tarp in load_seqdatabase.pl   Chris Fields
  • [Bioperl-l] found the error tarp in load_seqdatabase.pl   Hilmar Lapp
    • [Bioperl-l] found the error tarp in load_seqdatabase.pl   snoze pa
      • [Bioperl-l] found the error tarp in load_seqdatabase.pl   Hilmar Lapp
      • [Bioperl-l] found the error tarp in load_seqdatabase.pl   snoze pa
• [Bioperl-l] searchio/blast   Bernd Web
  • [Bioperl-l] searchio/blast   Chris Fields

Last message date: Thu Jan 31 15:21:18 EST 2008
Archived on: Thu Jan 31 15:21:39 EST 2008

• Messages sorted by: [ subject ] [ author ] [ date ]
• More info on this list...