[Bioperl-guts-l] [Bug 2576] SearchIO is ignoring an excellent match

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2576


cjfields at bioperl.org changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED




------- Comment #4 from cjfields at bioperl.org  2008-08-28 10:59 EST -------
The parser was passing over the first hit because the first line actually
matches the hit block regex.  I added some code to Bio::SearchIO::blast (in
subversion) to explicitly leave the hit block after encountering the first
blank line; this appears to fix the problem and passes all tests.  Feel free to
reopen this report if the fix doesn't work.


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.