[Bioperl-guts-l] [Bug 2573] New: Ontology tests failing

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Aug 27 11:30:41 EDT 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2573

           Summary: Ontology tests failing
           Product: BioPerl
           Version: main-trunk
          Platform: All
        OS/Version: Mac OS
            Status: NEW
          Severity: normal
          Priority: P2
         Component: bioperl-db
        AssignedTo: bioperl-guts-l at bioperl.org
        ReportedBy: cjfields at bioperl.org


Related to changes made with bug 2512 (I think it has to do with undef'd return
values in a list).

cjfields:db cjfields$ ./Build test --test-files t/12ontology.t 
t/12ontology......125/738 Can't call method "name" on an undefined value at
/Users/cjfields/bioperl/bioperl-live/Bio/Ontology/Ontology.pm line 452, <GEN0>
line 98.
t/12ontology...... Dubious, test returned 255 (wstat 65280, 0xff00)
 Failed 453/738 subtests 

Test Summary Report
-------------------
t/12ontology.t (Wstat: 65280 Tests: 285 Failed: 0)
  Non-zero exit status: 255
  Parse errors: Bad plan.  You planned 738 tests but ran 285.
Files=1, Tests=285,  1 wallclock secs ( 0.06 usr  0.01 sys +  1.04 cusr  0.09
csys =  1.20 CPU)
Result: FAIL
Failed 1/1 test programs. 0/285 subtests failed.


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.


More information about the Bioperl-guts-l mailing list