[Bioperl-guts-l] [Bug 2569] New: parsing PROJECT field in genbank files

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2569

           Summary: parsing PROJECT field in genbank files
           Product: BioPerl
           Version: main-trunk
          Platform: All
        OS/Version: All
            Status: NEW
          Severity: enhancement
          Priority: P2
         Component: Bio::SeqIO
        AssignedTo: bioperl-guts-l at bioperl.org
        ReportedBy: diez at kuicr.kyoto-u.ac.jp


I couldn't find a way to get the PROJECT line found in some genbank files. I
saw some mention about it in SeqIO::Handler::GenericRichSeqHandler.pm but no
implementation so far. The attached patch to genbank.pm parses this field and
adds it to the annotation object (as tag 'project') as an
Annotation::SimpleValue object. There is no Genbank files in the test/data
directory containing the PROJECT field, therefore i haven't added any test so
far.

d.


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